Molecule Type | heteromolecule |
Residue Name (RNME) | DTA |
Formula | C20H24N10O6S2 |
IUPAC InChI Key | KDTCHPHSAGGZDV-XPWFQUROSA-N |
IUPAC InChI | InChI=1S/C20H24N10O6S2/c21-15-9-17(25-3-23-15)29(5-27-9)19-13(33)11(31)7(35-19)1-37-38-2-8-12(32)14(34)20(36-8)30-6-28-10-16(22)24-4-26-18(10)30/h3-8,11-14,19-20,31-34H,1-2,21-22H2/t7-,8-,11-,12-,13-,14-,19-,20-/m1/s1 |
IUPAC Name | (2R,3R,4S,5S)-2-(6-aminopurin-9-yl)-5-[[(2S,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyldisulfanylmethyl]oxolane-3,4-diol |
Common Name | |
Canonical SMILES (Daylight) | O[C@@H]1[C@@H](CSSC[C@H]2O[C@H]([C@@H]([C@@H]2O)O)N2C=[N]=C3C2=[N]=[CH]=[N]=C3N)O[C@H]([C@@H]1O)N1C=[N]=C2C1=[N]=[CH]=[N]=C2N |
Number of atoms | 62 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 12100 |
PDB hetId | DTA |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 2:23:27 (hh:mm:ss) |
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