C11H15N5O2 | MD Topology | NMR | X-Ray

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Molecule Information

Molecule Typeheteromolecule
Residue Name (RNME)R8YC
FormulaC11H15N5O2
IUPAC InChI Key
FGLHWKPKUIWKRM-VLGHVQPOSA-N
IUPAC InChI
InChI=1S/C11H16N5O2/c12-9-8(16-17)10(15-11(13)14-9)18-6-7-4-2-1-3-5-7/h1-2,7,17H,3-6,12-13H2/b16-8+/t7-/m1/s1
IUPAC Name
Common Name
Canonical SMILES (Daylight)
O=NC1=[C](=[N]=[C](=[N]=C1OC[C@H]1CCC=CC1)N)N
Number of atoms33
Net Charge0
Forcefieldmultiple
Molecule ID230844
ChEMBL ID 303379
Visibility Public
Molecule Tags

Format

Molecular Dynamics (MD) Files

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X-Ray - Docking Files

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NMR Parameters

1H NMR Spectrum

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Fragment-Based Charges

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Topology History

Processing Information

QM Processing Stage

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Processing Stage Template Semi-Empirical QM (QM0) DFT QM (QM1) DFT Hessian QM (QM2)
Calculation None Energy Minization Energy Minization Hessian
Level of Theory None Semi-Empirical / SCF DFT (B3LYP/6-31G*) DFT (B3LYP/6-31G*)
Default Size Limit (Atoms) 2000 500 50 40
Content of MD Topology
Charges Derived From None MOPAC Merz-Singh-Kollman Merz-Singh-Kollman
Geometry  User Provided Optimized Optimized Optimized
Non-Bonded Interactions Bonds Rule Based:

Parameters are asigned from existing parameters with a set of rules based on atom types and geometry.

Hessian Based:

Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists.

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Data

Current Processing StateCompleted
Total Processing Time1 day, 4:12:11 (hh:mm:ss)

ATB Pipeline Setting

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Calculated Solvation Free Energy

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