Molecule Type | heteromolecule |
Residue Name (RNME) | 6IN2 |
Formula | C48H74N16O14S3 |
IUPAC InChI Key | ROKHTFJPMVFZSD-TVXXKUJBSA-N |
IUPAC InChI | InChI=1S/C48H76N16O14S3/c1-23(65)37-44(75)59-29(6-3-11-56-48(53)54)38(69)57-30(8-9-36(67)68)40(71)62-33(46(77)78)22-81-19-26-14-24-13-25(15-26)18-80-21-32(42(73)63-37)61-41(72)31(16-35(50)66)60-39(70)28(5-2-10-55-47(51)52)58-43(74)34-7-4-12-64(34)45(76)27(49)20-79-17-24/h13-15,23,27-34,37,55-56,65H,2-12,16-22,49,51-54H2,1H3,(H2,50,66)(H,57,69)(H,58,74)(H,59,75)(H,60,70)(H,61,72)(H,62,71)(H,63,73)(H,67,68)(H,77,78)/t23-,27+,28+,29+,30+,31+,32+,33+,34+,37+/m1/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | NC(=[NH2])NCCC[C@@H]1NC(=O)[C@@H](NC(=O)[C@@H]2CSCc3cc(CSC[C@H](NC(=O)[C@@H](NC1=O)CCC(=O)O)C(=O)O)cc(c3)CSC[C@H](N)C(=O)N1[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N2)CC(=O)N)CCCNC(=[NH2])N)CCC1)[C@H](O)C |
Number of atoms | 155 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 249671 |
Visibility | Public |
Molecule Tags |
Generating ...
Generating ...
Generating ...
No charge assignments available. Use the button above to use OFraMP fragment-based charge assignment.
Click table to toggle details.
Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:55:06 (hh:mm:ss) |
Access to this feature is currently restricted
The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
Access to this feature is currently restricted