Molecule Type | heteromolecule |
Residue Name (RNME) | X4VD |
Formula | C36H56N3O58S9 |
IUPAC InChI Key | KNQAVDBHNIASOF-KDXUKHBUSA-N |
IUPAC InChI | InChI=1S/C36H71N3O58S9/c40-10-7(37-98(54,55)56)31(53)84-4(1-81-101(63,64)65)17(10)87-35-24(96-105(75,76)77)15(45)20(26(93-35)29(49)50)90-33-9(39-100(60,61)62)12(42)19(6(86-33)3-83-103(69,70)71)89-36-25(97-106(78,79)80)16(46)21(27(94-36)30(51)52)91-32-8(38-99(57,58)59)11(41)18(5(85-32)2-82-102(66,67)68)88-34-23(95-104(72,73)74)14(44)13(43)22(92-34)28(47)48/h4-62H,1-3H2,(H,63,64,65)(H,66,67,68)(H,69,70,71)(H,72,73,74)(H,75,76,77)(H,78,79,80)/t4-,5-,6-,7+,8+,9+,10-,11-,12-,13-,14+,15+,16+,17+,18+,19+,20-,21-,22+,23+,24+,25+,26+,27+,31-,32+,33+,34-,35-,36-/m0/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | OS(=O)(=O)OC[C@@H]1O[C@H](O[C@@H]2[C@@H](O[C@@H]([C@@H]([C@@H]2O)OS(=O)(=O)O)O[C@@H]2[C@H](COS(=O)(=O)O)O[C@@H]([C@@H]([C@@H]2O)NS(O)(O)O)O[C@@H]2[C@@H](O[C@@H]([C@@H]([C@@H]2O)OS(=O)(=O)O)O[C@@H]2[C@H](COS(=O)(=O)O)O[C@@H]([C@@H]([C@@H]2O)NS(O)(O)O)O)C(O)O)C(O)O)[C@@H]([C@@H]([C@@H]1O[C@H]1O[C@@H](C(O)O)[C@H]([C@H]([C@H]1OS(=O)(=O)O)O)O)O)NS(O)(O)O |
Number of atoms | 162 |
Net Charge | -9 |
Forcefield | multiple |
Molecule ID | 27964 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 1:26:27 (hh:mm:ss) |
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