Molecule Type | heteromolecule |
Residue Name (RNME) | 5KVL |
Formula | C34H28O21 |
IUPAC InChI Key | LRUDKDABMXYYJF-NYEPDPHISA-N |
IUPAC InChI | InChI=1S/C34H28O21/c35-14(10-1-15(36)24(43)16(37)2-10)9-23-28(47)30(54-32(50)12-5-19(40)26(45)20(41)6-12)29(48)34(53-23)55-33(51)13-7-21(42)27(46)22(8-13)52-31(49)11-3-17(38)25(44)18(39)4-11/h1-8,23,28-30,34,36-48H,9H2/t23-,28+,29+,30+,34+/m1/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | O[C@@H]1[C@@H](O[C@@H]([C@@H]([C@@H]1OC(=O)c1cc(O)c(c(c1)O)O)O)CC(=O)c1cc(O)c(c(c1)O)O)OC(=O)c1cc(O)c(c(c1)OC(=O)c1cc(O)c(c(c1)O)O)O |
Number of atoms | 83 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 299194 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:10:17 (hh:mm:ss) |
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The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
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