Molecule Type | lipid |
Residue Name (RNME) | Z267 |
Formula | C70H130N2O24P2 |
IUPAC InChI Key | WNQXOUOZTTVUPR-GGQKVUGWSA-N |
IUPAC InChI | InChI=1S/C70H132N2O24P2/c1-6-11-16-21-25-27-31-36-41-46-60(78)90-53(43-38-33-28-23-18-13-8-3)48-59(77)72-63-67(94-61(79)47-52(74)42-37-32-20-15-10-5)66(95-97(83,84)85)56(50-73)92-69(63)89-51-57-64(80)65(81)62(70(93-57)96-98(86,87)88)71-58(76)49-54(44-39-34-29-24-19-14-9-4)91-68(82)55(75)45-40-35-30-26-22-17-12-7-2/h52-57,62-67,69-70,73-75,80-81H,6-51H2,1-5H3,(H,71,76)(H,72,77)(H2,83,84,85)(H2,86,87,88)/t52-,53-,54-,55+,56-,57-,62-,63-,64-,65-,66-,67-,69-,70-/m1/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | CCCCCCCCCCCC(=O)O[C@@H](CC(=O)N[C@H]1[C@H](OC[C@H]2O[C@H](OP(=O)(O)O)[C@@H]([C@H]([C@@H]2O)O)NC(=O)C[C@H](OC(=O)[C@H](CCCCCCCCCC)O)CCCCCCCCC)O[C@@H]([C@H]([C@@H]1OC(=O)C[C@@H](CCCCCCC)O)OP(=O)(O)O)CO)CCCCCCCCC |
Number of atoms | 228 |
Net Charge | -2 |
Forcefield | multiple |
Molecule ID | 302621 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 1:16:12 (hh:mm:ss) |
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