Molecule Type | heteromolecule |
Residue Name (RNME) | OMPZ |
Formula | C3H8O6P |
IUPAC InChI Key | AWUCVROLDVIAJX-VKHMYHEASA-N |
IUPAC InChI | InChI=1S/C3H9O6P/c4-1-3(5)2-9-10(6,7)8/h3-5H,1-2H2,(H2,6,7,8)/t3-/m0/s1 |
IUPAC Name | [(2S)-2,3-dihydroxypropyl] dihydrogen phosphate |
Common Name | Glycerol1-phosphate |
Canonical SMILES (Daylight) | OC[C@@H](COP(=O)(O)O)O |
Number of atoms | 18 |
Net Charge | -1 |
Forcefield | multiple |
Molecule ID | 302670 |
ChemSpider ID | 388409 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 2:34:11 (hh:mm:ss) |
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The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
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