Molecule Type | heteromolecule |
Residue Name (RNME) | 5C7U |
Formula | C42H90N4O21Si2 |
IUPAC InChI Key | XRVXOTRDFIFXNP-ZAQUEYBZSA-N |
IUPAC InChI | InChI=1S/C42H90N4O21Si2/c1-39(45-41(47)43-9-7-35-68(49,51-3)52-4)37-66-33-31-64-29-27-62-25-23-60-21-19-58-17-15-56-13-11-55-12-14-57-16-18-59-20-22-61-24-26-63-28-30-65-32-34-67-38-40(2)46-42(48)44-10-8-36-69(50,53-5)54-6/h39-40,49-50H,7-38H2,1-6H3,(H2,43,45,47)(H2,44,46,48)/t39-,40-/m0/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | C[C@H](NC(=O)NCCC[Si](O)(OC)OC)COCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOC[C@@H](NC(=O)NCCC[Si](O)(OC)OC)C |
Number of atoms | 159 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 304245 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 1:40:09 (hh:mm:ss) |
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The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
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