C16H14N4O | MD Topology | NMR | X-Ray

Visualize with JSmol

Molecule Information

Molecule Typeheteromolecule
Residue Name (RNME)R5D9
FormulaC16H14N4O
IUPAC InChI Key
HRRFMPVQBDIXIJ-HOTGVXAUSA-N
IUPAC InChI
InChI=1S/C16H14N4O/c1-2-6-12(7-3-1)16(20-11-17-18-19-20)15-10-13-8-4-5-9-14(13)21-15/h1-9,11,15-16H,10H2/t15-,16-/m0/s1
IUPAC Name
Common Name
Canonical SMILES (Daylight)
c1ccc(cc1)[C@H](n1cnnn1)[C@@H]1Cc2c(O1)cccc2
Number of atoms35
Net Charge0
Forcefieldmultiple
Molecule ID306553
ChEMBL ID 63612
Visibility Public
Molecule Tags

Force Field Parameters

Molecular Dynamics (MD) Files

Generating ...

X-Ray - Docking Files

Generating ...

NMR Parameters

1H NMR Spectrum

Generating ...

Topology History

Processing Information

QM Processing Stage

Click table to toggle details.

Processing Stage Template Semi-Empirical QM (QM0) DFT QM (QM1) DFT Hessian QM (QM2)
Calculation None Energy Minization Energy Minization Hessian
Level of Theory None Semi-Empirical / SCF DFT (B3LYP/6-31G*) DFT (B3LYP/6-31G*)
Default Size Limit (Atoms) 1000 500 50 40
Content of MD Topology
Charges Derived From None MOPAC Merz-Singh-Kollman Merz-Singh-Kollman
Geometry  User Provided Optimized Optimized Optimized
Non-Bonded Interactions Bonds Rule Based:

Parameters are asigned from existing parameters with a set of rules based on atom types and geometry.

Hessian Based:

Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists.

Angles
Dihedrals

Data

Current Processing StateCompleted
Total Processing Time1 day, 18:59:22 (hh:mm:ss)

ATB Pipeline Setting

Access to this feature is currently restricted

The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.

Experimental Solvation Free Energies (0-0 of 0)

Calculated Solvation Free Energy

Access to this feature is currently restricted

Submit New Solvation Free Energy Computation