Molecule Type | heteromolecule |
Residue Name (RNME) | JFKD |
Formula | C56H58O8 |
IUPAC InChI Key | LUUITGXKVJQBRV-LDHXOBTOSA-N |
IUPAC InChI | InChI=1S/C56H58O8/c1-38(39-20-8-2-9-21-39)32-45(40-22-10-3-11-23-40)35-49(44-30-18-7-19-31-44)53(56(63)64)51(55(61)62)36-47(42-26-14-5-15-27-42)33-46(41-24-12-4-13-25-41)34-48(43-28-16-6-17-29-43)50(54(59)60)37-52(57)58/h2-31,38,45-51,53H,32-37H2,1H3,(H,57,58)(H,59,60)(H,61,62)(H,63,64)/t38-,45-,46-,47+,48+,49+,50+,51-,53-/m1/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | OC(=O)C[C@H](C(=O)O)[C@H](c1ccccc1)C[C@H](c1ccccc1)C[C@H](c1ccccc1)C[C@@H](C(=O)O)[C@@H]([C@H](c1ccccc1)C[C@H](c1ccccc1)C[C@H](c1ccccc1)C)C(=O)O |
Number of atoms | 122 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 323754 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:20:10 (hh:mm:ss) |
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The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
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