Molecule Type | heteromolecule |
Residue Name (RNME) | 01GH |
Formula | C52H56S |
IUPAC InChI Key | YJXJDUSRCKWJTJ-GERZVQEASA-N |
IUPAC InChI | InChI=1S/C52H56S/c1-7-13-27-18-19-33-39-23-31(17-11-5)36-21-29(15-9-3)35-22-30(16-10-4)37-25-40-41(53-12-6)26-38-28(14-8-2)20-32-24-34(27)43(33)50-42(32)44(38)49(40)51-47(37)45(35)46(36)48(39)52(50)51/h18-19,21-23,25,28,32,38,41H,7-17,20,24,26H2,1-6H3/t28-,32+,38-,41-/m1/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | CCCc1c2C[C@@H]3C[C@@H](CCC)[C@H]4C[C@@H](SCC)c5cc6c(CCC)cc7c(CCC)cc8c9c7c6c6c5c4c3c3c6c9c(cc8CCC)c(cc1)c23 |
Number of atoms | 109 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 323964 |
Visibility | Public |
Molecule Tags |
Generating ...
Generating ...
Generating ...
No charge assignments available. Use the button above to use OFraMP fragment-based charge assignment.
Click table to toggle details.
Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:08:14 (hh:mm:ss) |
Access to this feature is currently restricted
The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
Access to this feature is currently restricted