Molecule Type | heteromolecule |
Residue Name (RNME) | 5RTY |
Formula | C68H80O2S8 |
IUPAC InChI Key | AVMQXWGAKMWCNO-ITMZJIMRSA-N |
IUPAC InChI | InChI=1S/C68H80O2S8/c1-9-17-22-41(13-5)36-45-27-29-50(73-45)57-47-33-35-72-65(47)58(51-30-28-46(74-51)37-42(14-6)23-18-10-2)48-40-54(77-66(48)57)49-31-32-53(75-49)68-62-61(67(78-68)52-26-21-34-71-52)63(69)59-55(38-43(15-7)24-19-11-3)76-56(60(59)64(62)70)39-44(16-8)25-20-12-4/h21,26-35,40-44H,9-20,22-25,36-39H2,1-8H3/t41-,42-,43-,44-/m0/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | CCCC[C@@H](Cc1ccc(s1)c1c2cc(sc2c(c2c1scc2)c1ccc(s1)C[C@H](CCCC)CC)c1ccc(s1)c1sc(c2c1C(=O)c1c(C2=O)c(sc1C[C@H](CCCC)CC)C[C@H](CCCC)CC)c1cccs1)CC |
Number of atoms | 158 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 336032 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:44:07 (hh:mm:ss) |
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The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
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