C16H11N3O5 | MD Topology | NMR | X-Ray

Visualize with JSmol

Molecule Information

Molecule Typeheteromolecule
Residue Name (RNME)BAH1
FormulaC16H11N3O5
IUPAC InChI Key
UUWDCQNVCGQFDS-UHFFFAOYSA-N
IUPAC InChI
InChI=1S/C16H12N3O5/c20-13(17-10-5-2-1-3-6-10)9-18-14-11(15(21)16(18)22)7-4-8-12(14)19(23)24/h1-8H,9H2,(H,17,20)(H,23,24)
IUPAC Name
Common Name
Canonical SMILES (Daylight)
O=C(CN1C(=O)C(=O)c2c1c(ccc2)[N+](=O)[O-])Nc1ccccc1
Number of atoms35
Net Charge0
Forcefieldmultiple
Molecule ID341174
ChEMBL ID 2424847
Visibility Public
Molecule Tags

Format

Molecular Dynamics (MD) Files

Generating ...

X-Ray - Docking Files

Generating ...

NMR Parameters

1H NMR Spectrum

Generating ...

Topology History

Processing Information

QM Processing Stage

Click table to toggle details.

Processing Stage Template Semi-Empirical QM (QM0) DFT QM (QM1) DFT Hessian QM (QM2)
Calculation None Energy Minization Energy Minization Hessian
Level of Theory None Semi-Empirical / SCF DFT (B3LYP/6-31G*) DFT (B3LYP/6-31G*)
Default Size Limit (Atoms) 1000 500 50 40
Content of MD Topology
Charges Derived From None MOPAC Merz-Singh-Kollman Merz-Singh-Kollman
Geometry  User Provided Optimized Optimized Optimized
Non-Bonded Interactions Bonds Rule Based:

Parameters are asigned from existing parameters with a set of rules based on atom types and geometry.

Hessian Based:

Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists.

Angles
Dihedrals

Data

Current Processing StateCompleted
Total Processing Time1 day, 21:20:03 (hh:mm:ss)

ATB Pipeline Setting

Access to this feature is currently restricted

The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.

Experimental Solvation Free Energies (0-0 of 0)

Calculated Solvation Free Energy

Access to this feature is currently restricted

Submit New Solvation Free Energy Computation