Molecule Type | heteromolecule |
Residue Name (RNME) | 8KEB |
Formula | C41H88N4O16 |
IUPAC InChI Key | WXSAYYVPWBSZCP-SBCNFXDDSA-N |
IUPAC InChI | InChI=1S/C41H92N4O16/c1-38(2,34(54)58-19-15-42(7,8)23-30(46)47)27-40(5,36(56)60-21-17-44(11,12)25-32(50)51)29-41(6,37(57)61-22-18-45(13,14)26-33(52)53)28-39(3,4)35(55)59-20-16-43(9,10)24-31(48)49/h30-37,46-57H,15-29H2,1-14H3/t34-,35+,36-,37-,40+,41-/m0/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | [O-][C@H](C[N+](CCO[C@@H]([C@](CC([C@H](OCC[N+](C[C@@H](O)[O-])(C)C)O)(C)C)(C[C@@]([C@H](OCC[N+](C[C@@H](O)[O-])(C)C)O)(CC([C@@H](OCC[N+](C[C@H](O)[O-])(C)C)O)(C)C)C)C)O)(C)C)O |
Number of atoms | 149 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 342360 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:16:04 (hh:mm:ss) |
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The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
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