C11H15N5O4 | MD Topology | NMR | X-Ray

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Molecule Information

Molecule Typeheteromolecule
Residue Name (RNME)TIMY
FormulaC11H15N5O4
IUPAC InChI Key
QNVCLQBYJCEXOK-UHFFFAOYSA-N
IUPAC InChI
InChI=1S/C11H16N5O4/c17-10(9-5-8(6-12-9)16(19)20)14-15-11(18)13-7-3-1-2-4-7/h5-7,12H,1-4H2,(H,14,17)(H,19,20)(H2,13,15,18)
IUPAC Name
Common Name
Canonical SMILES (Daylight)
O=C(c1[nH]cc(c1)[N+](=O)[O-])NNC(=O)NC1CCCC1
Number of atoms35
Net Charge0
Forcefieldmultiple
Molecule ID344745
ChEMBL ID 3310379
Visibility Public
Molecule Tags

Format

Molecular Dynamics (MD) Files

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X-Ray - Docking Files

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NMR Parameters

1H NMR Spectrum

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Topology History

Processing Information

QM Processing Stage

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Processing Stage Template Semi-Empirical QM (QM0) DFT QM (QM1) DFT Hessian QM (QM2)
Calculation None Energy Minization Energy Minization Hessian
Level of Theory None Semi-Empirical / SCF DFT (B3LYP/6-31G*) DFT (B3LYP/6-31G*)
Default Size Limit (Atoms) 1000 500 50 40
Content of MD Topology
Charges Derived From None MOPAC Merz-Singh-Kollman Merz-Singh-Kollman
Geometry  User Provided Optimized Optimized Optimized
Non-Bonded Interactions Bonds Rule Based:

Parameters are asigned from existing parameters with a set of rules based on atom types and geometry.

Hessian Based:

Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists.

Angles
Dihedrals

Data

Current Processing StateCompleted
Total Processing Time1 day, 0:26:14 (hh:mm:ss)

ATB Pipeline Setting

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Experimental Solvation Free Energies (0-0 of 0)

Calculated Solvation Free Energy

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