C12H13N5O5 | MD Topology | NMR | X-Ray

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Molecule Information

Molecule Typeheteromolecule
Residue Name (RNME)QCC9
FormulaC12H13N5O5
IUPAC InChI Key
UJRNIPAGBUWHTG-UHFFFAOYSA-N
IUPAC InChI
InChI=1S/C12H14N5O5/c1-16-7-8(17(20)21)5-10(16)11(18)14-15-12(19)13-6-9-3-2-4-22-9/h2-5,7H,6H2,1H3,(H,14,18)(H,20,21)(H2,13,15,19)
IUPAC Name
Common Name
Canonical SMILES (Daylight)
O=C(NNC(=O)c1cc(cn1C)[N+](=O)[O-])NCc1ccco1
Number of atoms35
Net Charge0
Forcefieldmultiple
Molecule ID344749
ChEMBL ID 3310389
Visibility Public
Molecule Tags

Format

Molecular Dynamics (MD) Files

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X-Ray - Docking Files

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NMR Parameters

1H NMR Spectrum

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Topology History

Processing Information

QM Processing Stage

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Processing Stage Template Semi-Empirical QM (QM0) DFT QM (QM1) DFT Hessian QM (QM2)
Calculation None Energy Minization Energy Minization Hessian
Level of Theory None Semi-Empirical / SCF DFT (B3LYP/6-31G*) DFT (B3LYP/6-31G*)
Default Size Limit (Atoms) 1000 500 50 40
Content of MD Topology
Charges Derived From None MOPAC Merz-Singh-Kollman Merz-Singh-Kollman
Geometry  User Provided Optimized Optimized Optimized
Non-Bonded Interactions Bonds Rule Based:

Parameters are asigned from existing parameters with a set of rules based on atom types and geometry.

Hessian Based:

Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists.

Angles
Dihedrals

Data

Current Processing StateCompleted
Total Processing Time17:56:02 (hh:mm:ss)

ATB Pipeline Setting

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Experimental Solvation Free Energies (0-0 of 0)

Calculated Solvation Free Energy

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