Molecule Type | heteromolecule |
Residue Name (RNME) | GNDH |
Formula | C46H85N3O12 |
IUPAC InChI Key | YQMUZQUKEFPTGI-QYKCCJMPSA-N |
IUPAC InChI | InChI=1S/C46H85N3O12/c1-11-14-33-20-26(2)19-27(3)21-39(58-9)42-40(59-10)23-29(5)46(56,61-42)43(53)44(54)49-18-13-12-15-35(49)45(55)60-41(30(6)37(52)25-34(33)48-47-31(7)50)28(4)22-32-16-17-36(51)38(24-32)57-8/h26-30,32-43,45,48,51-53,55-56H,11-25H2,1-10H3,(H,47,50)/t26-,27-,28-,29+,30-,32-,33+,34+,35-,36+,37-,38+,39+,40+,41+,42-,43-,45+,46+/m0/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | CCC[C@@H]1C[C@@H](C)C[C@H](C)C[C@@H](OC)[C@@H]2O[C@](O)([C@@H](C[C@H]2OC)C)[C@H](C(=O)N2[C@H]([C@@H](O[C@@H]([C@H]([C@H](C[C@H]1NNC(=O)C)O)C)[C@H](C[C@@H]1CC[C@H]([C@@H](C1)OC)O)C)O)CCCC2)O |
Number of atoms | 146 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 358369 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:16:10 (hh:mm:ss) |
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