Molecule Type | sugar |
Residue Name (RNME) | PKPU |
Formula | C48H80N6O30 |
IUPAC InChI Key | ZWAAMFZYFBMBJW-SPOLSXGFSA-N |
IUPAC InChI | InChI=1S/C48H80N6O30/c1-14(61)49-27-21(67)7-20(8-55)74-44(27)80-39-23(10-57)76-46(29(34(39)69)51-16(3)63)82-41-25(12-59)78-48(31(36(41)71)53-18(5)65)84-42-26(13-60)79-47(32(37(42)72)54-19(6)66)83-40-24(11-58)77-45(30(35(40)70)52-17(4)64)81-38-22(9-56)75-43(73)28(33(38)68)50-15(2)62/h20-48,55-60,67-73H,7-13H2,1-6H3,(H,49,61)(H,50,62)(H,51,63)(H,52,64)(H,53,65)(H,54,66)/t20-,21-,22+,23+,24+,25+,26+,27+,28+,29+,30+,31+,32+,33+,34+,35+,36+,37+,38+,39+,40+,41+,42+,43+,44-,45-,46-,47-,48-/m0/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | OC[C@@H]1C[C@H](O)[C@H]([C@@H](O1)O[C@@H]1[C@@H](CO)O[C@H]([C@@H]([C@H]1O)NC(=O)C)O[C@@H]1[C@@H](CO)O[C@H]([C@@H]([C@H]1O)NC(=O)C)O[C@@H]1[C@@H](CO)O[C@H]([C@@H]([C@H]1O)NC(=O)C)O[C@@H]1[C@@H](CO)O[C@H]([C@@H]([C@H]1O)NC(=O)C)O[C@@H]1[C@@H](CO)O[C@H]([C@@H]([C@H]1O)NC(=O)C)O)NC(=O)C |
Number of atoms | 164 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 364673 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:54:11 (hh:mm:ss) |
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