Molecule Type | heteromolecule |
Residue Name (RNME) | L87D |
Formula | C18H35N3O4 |
IUPAC InChI Key | JOIUZBTWMAYEQW-UHFFFAOYSA-N |
IUPAC InChI | InChI=1S/C18H35N3O4/c19-13-7-1-4-10-16(22)20-14-8-2-5-11-17(23)21-15-9-3-6-12-18(24)25/h1-15,19H2,(H,20,22)(H,21,23)(H,24,25) |
IUPAC Name | 6-[6-(6-aminohexanoylamino)hexanoylamino]hexanoic acid |
Common Name | |
Canonical SMILES (Daylight) | NCCCCCC(=O)NCCCCCC(=O)NCCCCCC(=O)O |
Number of atoms | 60 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 364718 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:08:32 (hh:mm:ss) |
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