Molecule Type | heteromolecule |
Residue Name (RNME) | 8LSN |
Formula | C54H104N6O7 |
IUPAC InChI Key | ZOINDFTVKYQKDP-UHFFFAOYSA-N |
IUPAC InChI | InChI=1S/C54H104N6O7/c55-43-31-19-7-1-13-25-37-49(61)56-44-32-20-8-2-14-26-38-50(62)57-45-33-21-9-3-15-27-39-51(63)58-46-34-22-10-4-16-28-40-52(64)59-47-35-23-11-5-17-29-41-53(65)60-48-36-24-12-6-18-30-42-54(66)67/h1-48,55H2,(H,56,61)(H,57,62)(H,58,63)(H,59,64)(H,60,65)(H,66,67) |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | NCCCCCCCCC(=O)NCCCCCCCCC(=O)NCCCCCCCCC(=O)NCCCCCCCCC(=O)NCCCCCCCCC(=O)NCCCCCCCCC(=O)O |
Number of atoms | 171 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 364921 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:08:09 (hh:mm:ss) |
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