Molecule Type | heteromolecule |
Residue Name (RNME) | EYF1 |
Formula | C56H110N4O5 |
IUPAC InChI Key | BUZFCOGSRLUHMT-UHFFFAOYSA-N |
IUPAC InChI | InChI=1S/C56H110N4O5/c57-49-41-33-25-17-9-1-5-13-21-29-37-45-53(61)58-50-42-34-26-18-10-2-6-14-22-30-38-46-54(62)59-51-43-35-27-19-11-3-7-15-23-31-39-47-55(63)60-52-44-36-28-20-12-4-8-16-24-32-40-48-56(64)65/h1-52,57H2,(H,58,61)(H,59,62)(H,60,63)(H,64,65) |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | NCCCCCCCCCCCCCC(=O)NCCCCCCCCCCCCCC(=O)NCCCCCCCCCCCCCC(=O)NCCCCCCCCCCCCCC(=O)O |
Number of atoms | 175 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 364923 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:08:07 (hh:mm:ss) |
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The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
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