C6F18P | MD Topology | NMR | X-Ray

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Molecule Information

Molecule Typesolvent
Residue Name (RNME)CZJ1
FormulaC6F18P
IUPAC InChI Key
BBXAPIAVBJOAOE-UHFFFAOYSA-N
IUPAC InChI
InChI=1S/C6F18P/c7-1(8,9)4(16,17)25(22,23,24,5(18,19)2(10,11)12)6(20,21)3(13,14)15
IUPAC Name
Common Name
Canonical SMILES (Daylight)
FC(P(C(C(F)(F)F)(F)F)(C(C(F)(F)F)(F)F)(F)(F)F)(C(F)(F)F)F
Number of atoms25
Net Charge-1
Forcefieldmultiple
Molecule ID458900
Visibility Public
Molecule Tags

Format

Molecular Dynamics (MD) Files

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X-Ray - Docking Files

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NMR Parameters

1H NMR Spectrum

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Fragment-Based Charges

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Topology History

Processing Information

QM Processing Stage

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Processing Stage Template Semi-Empirical QM (QM0) DFT QM (QM1) DFT Hessian QM (QM2)
Calculation None Energy Minization Energy Minization Hessian
Level of Theory None Semi-Empirical / SCF DFT (B3LYP/6-31G*) DFT (B3LYP/6-31G*)
Default Size Limit (Atoms) 2000 500 50 40
Content of MD Topology
Charges Derived From None MOPAC Merz-Singh-Kollman Merz-Singh-Kollman
Geometry  User Provided Optimized Optimized Optimized
Non-Bonded Interactions Bonds Rule Based:

Parameters are asigned from existing parameters with a set of rules based on atom types and geometry.

Hessian Based:

Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists.

Angles
Dihedrals

Data

Current Processing StateCompleted
Total Processing Time1 day, 1:50:10 (hh:mm:ss)

ATB Pipeline Setting

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Calculated Solvation Free Energy

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