Molecule Type | sugar |
Residue Name (RNME) | YHW3 |
Formula | C55H89N7O35 |
IUPAC InChI Key | ZMUNFPWLHVNISM-SUMNRYRDSA-N |
IUPAC InChI | InChI=1S/C55H91N7O35/c1-18(68)56-34-26(75)7-25(11-63)87-51(34)93-46-28(13-65)91-54(38(41(46)81)60-22(5)72)97-49-31(17-86-16-24(74)8-62(9-32(76)77)10-33(78)79)92-55(39(44(49)84)61-23(6)73)96-48-30(15-67)90-53(37(43(48)83)59-21(4)71)95-47-29(14-66)89-52(36(42(47)82)58-20(3)70)94-45-27(12-64)88-50(85)35(40(45)80)57-19(2)69/h24-31,34-55,63-67,74-75,80-85H,7-17H2,1-6H3,(H,56,68)(H,57,69)(H,58,70)(H,59,71)(H,60,72)(H,61,73)(H,76,77)(H,78,79)/t24-,25-,26-,27+,28+,29+,30+,31+,34+,35+,36+,37+,38+,39+,40+,41+,42+,43+,44+,45+,46+,47+,48+,49+,50+,51-,52-,53-,54-,55-/m0/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | CC(=O)N[C@@H]1[C@@H](O)C[C@@H](CO)O[C@H]1O[C@H]1[C@H](O)[C@@H](NC(=O)C)[C@@H](O[C@@H]1CO)O[C@H]1[C@H](O)[C@@H](NC(=O)C)[C@@H](O[C@@H]1COC[C@@H](O)CN(CC(=O)O)CC(=O)O)O[C@H]1[C@H](O)[C@@H](NC(=O)C)[C@@H](O[C@@H]1CO)O[C@H]1[C@H](O)[C@@H](NC(=O)C)[C@@H](O[C@@H]1CO)O[C@H]1[C@H](O)[C@@H](NC(=O)C)[C@H](O)O[C@@H]1CO |
Number of atoms | 186 |
Net Charge | -2 |
Forcefield | multiple |
Molecule ID | 459011 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:53:07 (hh:mm:ss) |
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