C12H26NO6P | MD Topology | NMR | X-Ray

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Molecule Information

Molecule Typeheteromolecule
Residue Name (RNME)JS0D
FormulaC12H26NO6P
IUPAC InChI Key
IFCUONOYOXAVBF-UHFFFAOYSA-N
IUPAC InChI
InChI=1S/C12H27NO6P/c1-12(2,3)11(14)17-9-10-19-20(15,16)18-8-7-13(4,5)6/h7-10H2,1-6H3,(H,15,16)
IUPAC Name
Common Name
Canonical SMILES (Daylight)
O=C(C(C)(C)C)OCCO[P@](=O)(OCC[N](C)(C)C)O
Number of atoms46
Net Charge0
Forcefieldmultiple
Molecule ID538795
Visibility Public
Molecule Tags

Format

Molecular Dynamics (MD) Files

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X-Ray - Docking Files

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NMR Parameters

1H NMR Spectrum

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Fragment-Based Charges

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Topology History

Processing Information

QM Processing Stage

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Processing Stage Template Semi-Empirical QM (QM0) DFT QM (QM1) DFT Hessian QM (QM2)
Calculation None Energy Minization Energy Minization Hessian
Level of Theory None Semi-Empirical / SCF DFT (B3LYP/6-31G*) DFT (B3LYP/6-31G*)
Default Size Limit (Atoms) 2000 500 50 40
Content of MD Topology
Charges Derived From None MOPAC Merz-Singh-Kollman Merz-Singh-Kollman
Geometry  User Provided Optimized Optimized Optimized
Non-Bonded Interactions Bonds Rule Based:

Parameters are asigned from existing parameters with a set of rules based on atom types and geometry.

Hessian Based:

Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists.

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Data

Current Processing StateCompleted
Total Processing Time1 day, 18:58:26 (hh:mm:ss)

ATB Pipeline Setting

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Calculated Solvation Free Energy

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