Molecule Type | amino acid |
Residue Name (RNME) | KKDL |
Formula | C31H49N5O12 |
IUPAC InChI Key | FQQFAYLPXZZCKN-MIPMXCFUSA-N |
IUPAC InChI | InChI=1S/C31H49N5O12/c1-14(27(42)33-6)35-29(44)20(36-28(43)15(2)34-17(4)38)11-18-7-9-19(10-8-18)46-30-25(24(40)23(39)21(13-37)47-30)48-22-12-31(5,32)26(41)16(3)45-22/h7-10,14-16,20-26,30,37,39-41H,11-13,32H2,1-6H3,(H,33,42)(H,34,38)(H,35,44)(H,36,43)/t14-,15-,16+,20-,21-,22-,23-,24-,25+,26+,30-,31-/m0/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | CNC(=O)[C@@H](NC(=O)[C@@H](NC(=O)[C@@H](NC(=O)C)C)Cc1ccc(cc1)O[C@H]1O[C@@H](CO)[C@@H]([C@@H]([C@H]1O[C@@H]1O[C@H](C)[C@H]([C@@](C1)(C)N)O)O)O)C |
Number of atoms | 97 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 606467 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:10:14 (hh:mm:ss) |
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The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
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