Molecule Type | heteromolecule |
Residue Name (RNME) | EKBO |
Formula | C68H181N35 |
IUPAC InChI Key | WIRXZTGRBHJPII-UHFFFAOYSA-N |
IUPAC InChI | InChI=1S/C68H181N35/c69-1-11-79-16-20-84-27-51-97(46-7-75)54-33-90-34-56-99(48-9-77)57-38-94-43-68-103(63-31-87-23-19-82-14-4-72)66-42-92-36-55-98(47-8-76)52-28-88-24-25-89-32-61-101(60-29-85-21-17-80-12-2-70)64-40-93-37-58-100(49-10-78)59-39-95-44-67-102(62-30-86-22-18-81-13-3-71)65-41-91-35-53-96(45-6-74)50-26-83-15-5-73/h79-80,83,86-90,93-95H,1-76,81-82,84-85,91-92H2,77-78H3 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | NCCNCC[NH2]CCN(CCNCCN(CCNCCN(CC[NH2]CCN(CCNCCN)CCN)CCNCC[NH2]CCN)CC[NH3])CCNCCNCCN(CC[NH2]CCN(CCNCCN(CCNCCN(CC[NH2]CCNCCN)CCN)CC[NH3])CCNCC[NH2]CCN)CCN |
Number of atoms | 284 |
Net Charge | 8 |
Forcefield | multiple |
Molecule ID | 609059 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 2:49:03 (hh:mm:ss) |
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