Molecule Type | heteromolecule |
Residue Name (RNME) | 1AT6 |
Formula | C42H69N15O12S2 |
IUPAC InChI Key | UDIJDVBKOGRHRF-NLXVKQHPSA-N |
IUPAC InChI | InChI=1S/C42H70N15O12S2/c43-14-6-4-11-25-36(63)57-31(41(68)69)22-71-70-21-24(45)34(61)54-28(17-23-9-2-1-3-10-23)39(66)53-27(13-8-16-49-42(47)48)37(64)52-26(12-5-7-15-44)38(65)56-30(20-58)40(67)55-29(18-32(46)59)35(62)50-19-33(60)51-25/h1-3,9-10,24-31,49,58H,4-8,11-22,43-45,47-48H2,(H2,46,59)(H,50,62)(H,51,60)(H,52,64)(H,53,66)(H,54,61)(H,55,67)(H,56,65)(H,57,63)(H,68,69)/t24-,25-,26-,27-,28-,29-,30-,31-/m0/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | NCCCC[C@@H]1NC(=O)[C@H](CCCNC(=[NH2])N)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@@H](N)CSSC[C@H](NC(=O)[C@@H](NC(=O)CNC(=O)[C@@H](NC(=O)[C@@H](NC1=O)CO)CC(=O)N)CCCCN)C(=O)O |
Number of atoms | 140 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 611328 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:23:04 (hh:mm:ss) |
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