Molecule Type | heteromolecule |
Residue Name (RNME) | DFMO |
Formula | C30H50O5 |
IUPAC InChI Key | IHRIPIGBSGFENE-JRKAGRPMSA-N |
IUPAC InChI | InChI=1S/C30H52O5/c1-25(2)21(33)10-12-27(5)17-9-13-28(6)24(30(8)14-11-22(35-30)26(3,4)34)20(32)16-29(28,7)18(17)15-19(31)23(25)27/h17-24,31-34H,9-16H2,1-8H3/t17-,18+,19+,20+,21+,22+,23-,24-,27+,28-,29-,30-/m1/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | O[C@H]1C[C@]2([C@]([C@@H]1[C@@]1(C)CC[C@H](O1)C(O)(C)C)(C)CC[C@@H]1[C@@H]2C[C@H](O)[C@H]2[C@@]1(C)CC[C@@H](C2(C)C)O)C |
Number of atoms | 85 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 613255 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:03:05 (hh:mm:ss) |
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The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
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