C101H144N26O19 | MD Topology | NMR | X-Ray

Visualize with JSmol

Molecule Information

Molecule Typeheteromolecule
Residue Name (RNME)SLTB
FormulaC101H144N26O19
IUPAC InChI Key
DQURGRMNDNJRRG-RUIGZERHSA-N
IUPAC InChI
InChI=1S/C101H144N26O19/c1-54(2)42-66(102)86(133)125-83(56(5)6)97(144)123-74(45-60-28-16-12-17-29-60)92(139)120-73(44-59-26-14-11-15-27-59)88(135)113-52-81(130)115-78(49-80(104)129)95(142)117-69(36-24-40-109-100(105)106)89(136)118-71(38-39-79(103)128)91(138)116-70(37-25-41-110-101(107)108)90(137)122-76(47-62-50-111-67-34-22-20-32-64(62)67)93(140)121-75(46-61-30-18-13-19-31-61)96(143)126-85(58(9)10)99(146)127-84(57(7)8)98(145)124-77(48-63-51-112-68-35-23-21-33-65(63)68)94(141)119-72(43-55(3)4)87(134)114-53-82(131)132/h11-23,26-35,50-51,54-58,66,69-78,83-85,109-112H,24-25,36-49,52-53,102,105-108H2,1-10H3,(H2,103,128)(H2,104,129)(H,113,135)(H,114,134)(H,115,130)(H,116,138)(H,117,142)(H,118,136)(H,119,141)(H,120,139)(H,121,140)(H,122,137)(H,123,144)(H,124,145)(H,125,133)(H,126,143)(H,127,146)(H,131,132)/t66-,69-,70-,71-,72-,73-,74-,75-,76-,77-,78-,83-,84-,85-/m0/s1
IUPAC Name
Common Name
Canonical SMILES (Daylight)
CC(C[C@@H](C(=O)NCC(=O)O)NC(=O)[C@H](Cc1c[nH]c2c1cccc2)NC(=O)[C@H](C(C)C)NC(=O)[C@H](C(C)C)NC(=O)[C@@H](NC(=O)[C@H](Cc1c[nH]c2c1cccc2)NC(=O)[C@@H](NC(=O)[C@@H](NC(=O)[C@@H](NC(=O)[C@@H](NC(=O)CNC(=O)[C@@H](NC(=O)[C@@H](NC(=O)[C@H](C(C)C)NC(=O)[C@H](CC(C)C)N)Cc1ccccc1)Cc1ccccc1)CC(=O)N)CCCNC(=[NH2])N)CCC(=O)N)CCCNC(=[NH2])N)Cc1ccccc1)C
Number of atoms290
Net Charge2
Forcefieldmultiple
Molecule ID701761
Visibility Public
Molecule Tags

Format

Molecular Dynamics (MD) Files

Generating ...

X-Ray - Docking Files

Generating ...

NMR Parameters

1H NMR Spectrum

Generating ...

Fragment-Based Charges

No charge assignments available. Use the button above to use OFraMP fragment-based charge assignment.

Topology History

Processing Information

QM Processing Stage

Click table to toggle details.

Processing Stage Template Semi-Empirical QM (QM0) DFT QM (QM1) DFT Hessian QM (QM2)
Calculation None Energy Minization Energy Minization Hessian
Level of Theory None Semi-Empirical / SCF DFT (B3LYP/6-31G*) DFT (B3LYP/6-31G*)
Default Size Limit (Atoms) 2000 500 50 40
Content of MD Topology
Charges Derived From None MOPAC Merz-Singh-Kollman Merz-Singh-Kollman
Geometry  User Provided Optimized Optimized Optimized
Non-Bonded Interactions Bonds Rule Based:

Parameters are asigned from existing parameters with a set of rules based on atom types and geometry.

Hessian Based:

Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists.

Angles
Dihedrals

Data

Current Processing StateCompleted
Total Processing Time14:35:08 (hh:mm:ss)

ATB Pipeline Setting

Access to this feature is currently restricted

The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.

Calculated Solvation Free Energy

Access to this feature is currently restricted

Submit New Solvation Free Energy Computation