Molecule Type | heteromolecule |
Residue Name (RNME) | U9K2 |
Formula | C54H110N9O37 |
IUPAC InChI Key | GPNWGBGHJVLSPW-FNGKVCETSA-N |
IUPAC InChI | InChI=1S/C54H110N9O37/c55-19-30(75)38(11(2-65)84-46(19)83)93-48-21(57)32(77)40(13(4-67)86-48)95-50-23(59)34(79)42(15(6-69)88-50)97-52-25(61)36(81)44(17(8-71)90-52)99-54-27(63)37(82)45(18(9-72)92-54)100-53-26(62)35(80)43(16(7-70)91-53)98-51-24(60)33(78)41(14(5-68)89-51)96-49-22(58)31(76)39(12(3-66)87-49)94-47-20(56)29(74)28(73)10(1-64)85-47/h10-54,64-83H,1-9H2,55-63H3/t10-,11+,12+,13-,14-,15-,16-,17-,18+,19-,20+,21-,22+,23-,24-,25-,26-,27+,28+,29+,30-,31-,32-,33-,34-,35-,36+,37-,38-,39+,40-,41+,42-,43+,44+,45+,46-,47+,48+,49-,50+,51-,52-,53-,54-/m0/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | OC[C@H]1O[C@@H](O[C@@H]2[C@H](CO)O[C@H]([C@H]([C@H]2O)[NH3])O[C@H]2[C@H](CO)O[C@@H]([C@H]([C@@H]2O)[NH3])O[C@H]2[C@H](CO)O[C@@H]([C@H]([C@@H]2O)[NH3])O[C@H]2[C@@H](CO)O[C@@H]([C@H]([C@@H]2O)[NH3])O)[C@@H]([C@@H]([C@@H]1O[C@@H]1O[C@@H](CO)[C@H]([C@H]([C@@H]1[NH3])O)O[C@@H]1O[C@@H](CO)[C@H]([C@H]([C@@H]1[NH3])O)O[C@@H]1O[C@H](CO)[C@H]([C@H]([C@H]1[NH3])O)O[C@H]1O[C@@H](CO)[C@H]([C@@H]([C@H]1[NH3])O)O)O)[NH3] |
Number of atoms | 210 |
Net Charge | 9 |
Forcefield | multiple |
Molecule ID | 1156801 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:36:48 (hh:mm:ss) |
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