Molecule Type | heteromolecule |
Residue Name (RNME) | PNRH |
Formula | C72H114N4O54 |
IUPAC InChI Key | YEXMQZSQXDXDTK-MKTRLBQSSA-N |
IUPAC InChI | InChI=1S/C72H114N4O54/c1-43(77)31-111-65(89)125-51(9)39-119-69(93)127-47(5)35-113-61(85)105-25-23-101-57(81)97-19-21-99-59(83)103-27-29-107-63(87)121-49(7)37-115-71(95)129-53(11)41-117-67(91)123-45(3)33-109-55(79)75-17-15-73-13-14-74-16-18-76-56(80)110-34-46(4)124-68(92)118-42-54(12)130-72(96)116-38-50(8)122-64(88)108-30-28-104-60(84)100-22-20-98-58(82)102-24-26-106-62(86)114-36-48(6)128-70(94)120-40-52(10)126-66(90)112-32-44(2)78/h43-54,73-74,77-78H,13-42H2,1-12H3,(H,75,79)(H,76,80)/t43-,44-,45+,46+,47-,48-,49+,50+,51-,52-,53+,54+/m0/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | C[C@@H](OC(=O)OC[C@H](OC(=O)OC[C@H](OC(=O)OCCOC(=O)OCCOC(=O)OCCOC(=O)OC[C@@H](OC(=O)OC[C@@H](OC(=O)OC[C@@H](O)C)C)C)C)C)COC(=O)NCCNCCNCCNC(=O)OC[C@H](OC(=O)OC[C@H](OC(=O)OC[C@H](OC(=O)OCCOC(=O)OCCOC(=O)OCCOC(=O)OC[C@@H](OC(=O)OC[C@@H](OC(=O)OC[C@@H](O)C)C)C)C)C)C |
Number of atoms | 244 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 1249823 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 1:42:06 (hh:mm:ss) |
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