C19H20N4O3 | MD Topology | NMR | X-Ray

Visualize with JSmol

Show Structure

Molecule Information
Molecule Typeheteromolecule
Residue Name (RNME)6B3L
FormulaC19H20N4O3
IUPAC InChI Key
DIYJXOYJXSKXRB-UHFFFAOYSA-N
IUPAC InChI
InChI=1S/C19H21N4O3/c1-21(2)10-11-22-17-9-8-15(23(25)26)12-16(17)19(20-13-18(22)24)14-6-4-3-5-7-14/h3-9,12H,10-11,13H2,1-2H3,(H,25,26)
IUPAC Name
Common Name
Canonical SMILES (Daylight)
CN(CCN1C(=O)CN=C(c2c1ccc(c2)[N+](=O)[O-])c1ccccc1)C
Number of atoms46
Net Charge0
Forcefieldmultiple
Molecule ID1907853
ChEMBL ID 315429
Visibility Public
Molecule Tags

Format

Molecular Dynamics (MD) Files

Generating ...

X-Ray - Docking Files

Generating ...

NMR Parameters

1H NMR Spectrum

Generating ...

Fragment-Based Charges

No charge assignments available. Use the button above to use OFraMP fragment-based charge assignment.

Topology History

Processing Information

QM Processing Stage

Click table to toggle details.

Processing Stage Template Semi-Empirical QM (QM0) DFT QM (QM1) DFT Hessian QM (QM2)
Calculation None Energy Minization Energy Minization Hessian
Level of Theory None Semi-Empirical / SCF DFT (B3LYP/6-31G*) DFT (B3LYP/6-31G*)
Default Size Limit (Atoms) 2000 500 50 40
Content of MD Topology
Charges Derived From None MOPAC Merz-Singh-Kollman Merz-Singh-Kollman
Geometry  User Provided Optimized Optimized Optimized
Non-Bonded Interactions Bonds Rule Based:

Parameters are asigned from existing parameters with a set of rules based on atom types and geometry.

 Hessian Based:

Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists.
Angles
Dihedrals

Data

Current Processing StateCompleted
Total Processing Time2:28:00 (hh:mm:ss)

ATB Pipeline Setting

Calculated Solvation Free Energy

Access to this feature is currently restricted

Submit New Solvation Free Energy Computation

Conditions of Use