Molecule Type | amino acid |
Residue Name (RNME) | K78M |
Formula | C60H75N9O6 |
IUPAC InChI Key | FAZWRMLVVUNENG-AGSXMURVSA-N |
IUPAC InChI | InChI=1S/C60H78N9O6/c1-40(2)34-52-58(73)67(31-13-19-46-16-7-10-28-61-46)49-25-23-44(38-49)56(71)65-54(36-42(5)6)60(75)69(33-15-21-48-18-9-12-30-63-48)51-27-24-45(39-51)57(72)66-53(35-41(3)4)59(74)68(32-14-20-47-17-8-11-29-62-47)50-26-22-43(37-50)55(70)64-52/h7-12,28-30,40-45,49-54H,16-18,22-27,31-39H2,1-6H3,(H,64,70)(H,65,71)(H,66,72)/t43-,44-,45-,49+,50+,51+,52-,53-,54-/m1/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | CC(C[C@H]1NC(=O)[C@@H]2CC[C@@H](C2)N(CC#CC2=[N]=CCC=C2)C(=O)[C@@H](CC(C)C)NC(=O)[C@@H]2CC[C@H](N(C(=O)[C@H](NC(=O)[C@H]3C[C@@H](N(C1=O)CC#CC1=[N]=CC=CC1)CC3)CC(C)C)CC#CC1=[N]=CCC=C1)C2)C |
Number of atoms | 150 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 230774 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:10:04 (hh:mm:ss) |
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The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
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