Molecule Type | heteromolecule |
Residue Name (RNME) | P538 |
Formula | C52H76S5 |
IUPAC InChI Key | NOVDOLTXBDTEGJ-UHFFFAOYSA-N |
IUPAC InChI | InChI=1S/C52H76S5/c1-8-13-18-23-28-40-34-45(54-39(40)7)50-42(30-25-20-15-10-3)36-47(56-50)52-44(32-27-22-17-12-5)37-48(57-52)51-43(31-26-21-16-11-4)35-46(55-51)49-41(33-38(6)53-49)29-24-19-14-9-2/h33-37H,8-32H2,1-7H3 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | CCCCCCc1cc(sc1c1cc(c(s1)c1cc(c(s1)C)CCCCCC)CCCCCC)c1sc(cc1CCCCCC)c1sc(cc1CCCCCC)C |
Number of atoms | 133 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 23088 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:21:19 (hh:mm:ss) |
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