Molecule Type | heteromolecule |
Residue Name (RNME) | EX5R |
Formula | C41H55FO4S4 |
IUPAC InChI Key | AFEMPLXXLSJBFN-KCHLEUMXSA-N |
IUPAC InChI | InChI=1S/C41H55FO4S4/c1-7-13-16-26(10-4)22-44-35-29-19-20-47-37(29)36(45-23-27(11-5)17-14-8-2)30-21-31(49-38(30)35)39-33-32(25-48-39)50-40(34(33)42)41(43)46-24-28(12-6)18-15-9-3/h19-21,25-28H,7-18,22-24H2,1-6H3/t26-,27-,28-/m0/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | CCCC[C@@H](COC(=O)c1sc2c(c1F)c(sc2)c1sc2c(c1)c(OC[C@H](CCCC)CC)c1c(c2OC[C@H](CCCC)CC)ccs1)CC |
Number of atoms | 105 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 253353 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:10:04 (hh:mm:ss) |
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The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
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