Molecule Type | heteromolecule |
Residue Name (RNME) | C0XD |
Formula | C59H70N7O16S3 |
IUPAC InChI Key | LDYLNVGDXBPTNG-OCNVXVROSA-N |
IUPAC InChI | InChI=1S/C59H77N7O16S3/c1-58(2)42-33-38(84(74,75)76)24-26-45(42)63(48(58)21-8-6-9-22-49-59(3,4)43-34-39(85(77,78)79)25-27-46(43)64(49)31-16-32-81-83(72)73)30-15-7-10-23-50(67)60-29-28-51(68)65-35-37-17-11-12-18-40(37)53-52(41-19-13-14-20-44(41)65)61-62-66(53)36-47-54(69)55(70)56(71)57(80-5)82-47/h6,8,11-14,17-22,24-27,33-34,47,53-57,62,69-71,74-79H,7,9-10,15-16,23,28-32,35-36H2,1-5H3,(H,60,67)(H,72,73)/b8-6+,48-21+,49-22-/t47-,53-,54-,55+,56-,57-/m1/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | CO[C@@H]1O[C@H](CN2NN=C3[C@H]2c2ccccc2CN(c2c3cccc2)C(=O)CCNC(=O)CCCCCN2c3ccc(cc3C(/C/2=CC=CC/C=C2/N(CCCO[S@](=O)O)c3c(C2(C)C)cc(cc3)S(O)(O)O)(C)C)S(O)(O)O)[C@H]([C@@H]([C@H]1O)O)O |
Number of atoms | 155 |
Net Charge | 1 |
Forcefield | multiple |
Molecule ID | 26310 |
Visibility | Public |
Molecule Tags |
Generating ...
Generating ...
Generating ...
No charge assignments available. Use the button above to use OFraMP fragment-based charge assignment.
Click table to toggle details.
Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:53:18 (hh:mm:ss) |
Access to this feature is currently restricted
The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
Access to this feature is currently restricted