5,5-Dimethyl-2-oxohexanal | C8H13O2 | MD Topology | NMR | X-Ray

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Molecule Information

Molecule Typeamino acid
Residue Name (RNME)U0A5
FormulaC8H13O2
IUPAC InChI Key
SFNZAHNJPXQVAG-SSDOTTSWSA-N
IUPAC InChI
InChI=1S/C8H16O2/c1-8(2,3)5-4-7(10)6-9/h6-7,10H,4-5H2,1-3H3/t7-/m1/s1
IUPAC Name
5,5-dimethyl-2-oxohexanal
Common Name5,5-Dimethyl-2-oxohexanal
Canonical SMILES (Daylight)
O=CC(=O)CCC(C)(C)C
Number of atoms23
Net Charge-1
Forcefieldmultiple
Molecule ID275029
ChemSpider ID11539959
Visibility Public
Molecule Tags

Format

Molecular Dynamics (MD) Files

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X-Ray - Docking Files

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NMR Parameters

1H NMR Spectrum

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Fragment-Based Charges

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Topology History

Processing Information

QM Processing Stage

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Processing Stage Template Semi-Empirical QM (QM0) DFT QM (QM1) DFT Hessian QM (QM2)
Calculation None Energy Minization Energy Minization Hessian
Level of Theory None Semi-Empirical / SCF DFT (B3LYP/6-31G*) DFT (B3LYP/6-31G*)
Default Size Limit (Atoms) 2000 500 50 40
Content of MD Topology
Charges Derived From None MOPAC Merz-Singh-Kollman Merz-Singh-Kollman
Geometry  User Provided Optimized Optimized Optimized
Non-Bonded Interactions Bonds Rule Based:

Parameters are asigned from existing parameters with a set of rules based on atom types and geometry.

Hessian Based:

Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists.

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Data

Current Processing StateCompleted
Total Processing Time4:56:00 (hh:mm:ss)

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Calculated Solvation Free Energy

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