Molecule Type | heteromolecule |
Residue Name (RNME) | AMY7 |
Formula | C16H10O12P4 |
IUPAC InChI Key | HOIYXYPTPMWEHA-UHFFFAOYSA-N |
IUPAC InChI | InChI=1S/C16H14O12P4/c17-29(18,19)11-5-13(31(23,24)25)9-3-4-10-14(32(26,27)28)6-12(30(20,21)22)8-2-1-7(11)15(9)16(8)10/h1-6H,(H2,17,18,19)(H2,20,21,22)(H2,23,24,25)(H2,26,27,28) |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | [O-]=P(c1cc(c2c3c1ccc1c3c(cc2)c(cc1[P@@](=O)(O)[O-])[P@](=O)(O)[O-])[P@](=O)(O)[O-])(O)O |
Number of atoms | 42 |
Net Charge | -4 |
Forcefield | multiple |
Molecule ID | 304248 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 1 day, 4:05:44 (hh:mm:ss) |
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