Molecule Type | heteromolecule |
Residue Name (RNME) | NXDJ |
Formula | C61H84O60 |
IUPAC InChI Key | VUVVZVWFJUXJBD-LUYHNYAOSA-N |
IUPAC InChI | InChI=1S/C61H84O60/c62-4-2-103-25(43(83)84)3(5(4)63)1-104-53-17(75)8(66)26(35(114-53)45(87)88)106-55-19(77)10(68)28(37(116-55)47(91)92)108-57-21(79)12(70)30(39(118-57)49(95)96)110-59-23(81)14(72)32(41(120-59)51(99)100)112-61-24(82)15(73)33(42(121-61)52(101)102)111-60-22(80)13(71)31(40(119-60)50(97)98)109-58-20(78)11(69)29(38(117-58)48(93)94)107-56-18(76)9(67)27(36(115-56)46(89)90)105-54-16(74)6(64)7(65)34(113-54)44(85)86/h3-42,53-82H,1-2H2,(H,83,84)(H,85,86)(H,87,88)(H,89,90)(H,91,92)(H,93,94)(H,95,96)(H,97,98)(H,99,100)(H,101,102)/t3-,4-,5-,6-,7-,8-,9+,10+,11-,12+,13-,14-,15-,16+,17-,18+,19+,20+,21-,22-,23+,24+,25-,26+,27-,28+,29-,30+,31-,32+,33+,34-,35-,36-,37+,38-,39+,40-,41+,42+,53-,54-,55+,56+,57+,58-,59+,60-,61+/m1/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | OC(=O)[C@H]1O[C@H](O[C@@H]2[C@H](O[C@@H]([C@@H]([C@@H]2O)O)O[C@@H]2[C@H](O[C@@H]([C@H]([C@@H]2O)O)O[C@@H]2[C@@H](O[C@H]([C@@H]([C@H]2O)O)OC[C@@H]2[C@@H](O)[C@H](O)CO[C@H]2C(=O)O)C(=O)O)C(=O)O)C(=O)O)[C@H]([C@H]([C@@H]1O[C@H]1O[C@H](C(=O)O)[C@H]([C@@H]([C@@H]1O)O)O[C@@H]1O[C@@H](C(=O)O)[C@@H]([C@@H]([C@H]1O)O)O[C@@H]1O[C@@H](C(=O)O)[C@@H]([C@@H]([C@@H]1O)O)O[C@H]1O[C@@H](C(=O)O)[C@@H]([C@H]([C@@H]1O)O)O[C@@H]1O[C@@H](C(=O)O)[C@@H]([C@H]([C@@H]1O)O)O)O)O |
Number of atoms | 205 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 33875 |
Visibility | Public |
Molecule Tags |
Generating ...
Generating ...
Generating ...
No charge assignments available. Use the button above to use OFraMP fragment-based charge assignment.
Click table to toggle details.
Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 3:03:12 (hh:mm:ss) |
Access to this feature is currently restricted
The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
Access to this feature is currently restricted