C12H16N2O3S2 | MD Topology | NMR | X-Ray

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Molecule Information

Molecule Typeheteromolecule
Residue Name (RNME)GI7B
FormulaC12H16N2O3S2
IUPAC InChI Key
LGKKCFZDTFLKSC-NXEZZACHSA-N
IUPAC InChI
InChI=1S/C12H16N2O3S2/c1-13-9-6-7-14(10(9)4-5-11(13)15)19(16,17)12-3-2-8-18-12/h2-3,8-10H,4-7H2,1H3/t9-,10-/m1/s1
IUPAC Name
Common Name
Canonical SMILES (Daylight)
O=C1CC[C@@H]2[C@H](N1C)CCN2S(=O)(=O)c1cccs1
Number of atoms35
Net Charge0
Forcefieldmultiple
Molecule ID345952
ChEMBL ID 3440580
Visibility Public
Molecule Tags

Format

Molecular Dynamics (MD) Files

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X-Ray - Docking Files

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NMR Parameters

1H NMR Spectrum

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Fragment-Based Charges

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Topology History

Processing Information

QM Processing Stage

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Processing Stage Template Semi-Empirical QM (QM0) DFT QM (QM1) DFT Hessian QM (QM2)
Calculation None Energy Minization Energy Minization Hessian
Level of Theory None Semi-Empirical / SCF DFT (B3LYP/6-31G*) DFT (B3LYP/6-31G*)
Default Size Limit (Atoms) 2000 500 50 40
Content of MD Topology
Charges Derived From None MOPAC Merz-Singh-Kollman Merz-Singh-Kollman
Geometry  User Provided Optimized Optimized Optimized
Non-Bonded Interactions Bonds Rule Based:

Parameters are asigned from existing parameters with a set of rules based on atom types and geometry.

Hessian Based:

Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists.

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Data

Current Processing StateCompleted
Total Processing Time1 day, 9:56:02 (hh:mm:ss)

ATB Pipeline Setting

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Calculated Solvation Free Energy

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