Molecule Type | heteromolecule |
Residue Name (RNME) | B3HP |
Formula | C51H55NS |
IUPAC InChI Key | IJSISZVCNXUXFV-ZRCIBVMISA-N |
IUPAC InChI | InChI=1S/C51H56NS/c1-4-7-10-14-30-16-19-35-36-20-17-33-28-52-40-21-18-32-26-39-31(15-11-9-13-23-53-22-12-8-5-2)25-37-29(6-3)24-34-27-38(30)44(35)49-43(34)46(37)47(39)50-41(32)48(40)42(33)45(36)51(49)50/h16-21,26,28-29,31,34,37,46H,4-15,22-25,27H2,1-3H3/t29-,31+,34-,37+,46?/m0/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | CCCCCSCCCCC[C@@H]1C[C@@H]2[C@@H](CC)C[C@@H]3C4=c5c6c7c(c1cc1ccc8=[N]=Cc9c(c8c71)c6c(c1c5c(C3)c(CCCCC)cc1)cc9)[C@@H]24 |
Number of atoms | 108 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 346093 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:08:04 (hh:mm:ss) |
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The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
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