Molecule Type | heteromolecule |
Residue Name (RNME) | 0QNP |
Formula | C51H55NOS |
IUPAC InChI Key | AFVKDPYQLYKRKS-JIVKFWDSSA-N |
IUPAC InChI | InChI=1S/C51H56NOS/c1-4-7-10-14-29-16-18-33-37-26-40(53)38-27-52-39-19-17-31-24-36-30(15-11-9-13-21-54-20-12-8-5-2)23-34-28(6-3)22-32-25-35(29)43(33)49-42(32)44(34)45(36)50-41(31)48(39)47(38)46(37)51(49)50/h16-19,24,26-28,30,32,34,44,53H,4-15,20-23,25H2,1-3H3/t28-,30+,32-,34+,44?/m0/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | CCCCCSCCCCC[C@@H]1C[C@@H]2[C@@H](CC)C[C@@H]3C4=c5c6c7c(c1cc1ccc8=[N]=Cc9c(c8c71)c6c(c1c5c(C3)c(CCCCC)cc1)cc9O)[C@H]24 |
Number of atoms | 109 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 346100 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:10:33 (hh:mm:ss) |
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The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
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