Molecule Type | heteromolecule |
Residue Name (RNME) | DDT2 |
Formula | C56H40O16 |
IUPAC InChI Key | NWEXEFLZNBGSJP-MOUTVQLLSA-N |
IUPAC InChI | InChI=1S/C56H40O16/c1-21-29-13-34-23(3)31-15-36-24(4)32-16-35-22(2)30-14-33(21)45-18-42(30)66-50-10-26(58)7-39(63)55(50)71-47(35)20-44(32)68-52-12-28(60)8-40(64)56(52)72-48(36)19-43(31)67-51-11-27(59)6-38(62)54(51)70-46(34)17-41(29)65-49-9-25(57)5-37(61)53(49)69-45/h5-24,57-64H,1-4H3/t21-,22-,23-,24-/m1/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | Oc1cc(O)c2c(c1)Oc1cc3Oc4c(O)cc(cc4Oc4c5[C@H](c3cc1[C@H](c1c(O2)cc2Oc3cc(O)cc(c3Oc3c([C@@H](c2c1)C)cc1[C@H](c(c5)c(c4)Oc2c(Oc1c3)cc(cc2O)O)C)O)C)C)O |
Number of atoms | 112 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 438458 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:09:48 (hh:mm:ss) |
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The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
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