Molecule Type | heteromolecule |
Residue Name (RNME) | LSUB |
Formula | C98H150N16O16 |
IUPAC InChI Key | FJRDAJDSIJXPFU-GGKPMBBOSA-N |
IUPAC InChI | InChI=1S/C98H150N16O16/c1-67(99-37-3-19-83(99)115)53-71(103-41-7-23-87(103)119)57-75(107-45-11-27-91(107)123)61-79(111-49-15-31-95(111)127)65-81(113-51-17-33-97(113)129)63-77(109-47-13-29-93(109)125)59-73(105-43-9-25-89(105)121)55-69(101-39-5-21-85(101)117)35-36-70(102-40-6-22-86(102)118)56-74(106-44-10-26-90(106)122)60-78(110-48-14-30-94(110)126)64-82(114-52-18-34-98(114)130)66-80(112-50-16-32-96(112)128)62-76(108-46-12-28-92(108)124)58-72(104-42-8-24-88(104)120)54-68(2)100-38-4-20-84(100)116/h67-82H,3-66H2,1-2H3/t67-,68-,69-,70+,71-,72+,73-,74+,75-,76+,77-,78+,79-,80+,81-,82+/m1/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | O=C1CCCN1[C@H](C[C@H](N1CCCC1=O)C[C@H](N1CCCC1=O)C[C@H](N1CCCC1=O)C[C@@H](N1CCCC1=O)C[C@@H](N1CCCC1=O)C[C@@H](N1CCCC1=O)C[C@H](N1CCCC1=O)C)CC[C@@H](N1CCCC1=O)C[C@@H](N1CCCC1=O)C[C@@H](N1CCCC1=O)C[C@@H](N1CCCC1=O)C[C@H](N1CCCC1=O)C[C@H](N1CCCC1=O)C[C@H](N1CCCC1=O)C[C@H](N1CCCC1=O)C |
Number of atoms | 280 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 458747 |
Visibility | Public |
Molecule Tags |
Generating ...
Generating ...
Generating ...
No charge assignments available. Use the button above to use OFraMP fragment-based charge assignment.
Click table to toggle details.
Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 3:50:14 (hh:mm:ss) |
Access to this feature is currently restricted
The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
Access to this feature is currently restricted