Molecule Type | heteromolecule |
Residue Name (RNME) | N8NU |
Formula | C66H118N3O27P |
IUPAC InChI Key | XRRYTJWTFUMAJJ-YXLWXPJJSA-N |
IUPAC InChI | InChI=1S/C66H118N3O27P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-38-49(72)88-44-46(91-50(73)39-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2)45-90-97(85,86)89-43-41-68-48(71)37-34-33-36-47(70)67-40-35-42-87-63-51(69-66(83)84)52(74)59(62(82)96-63)93-65-57(79)58(56(78)61(81)95-65)92-64-55(77)53(75)54(76)60(80)94-64/h17-20,46,51-65,69,74-82H,3-16,21-45H2,1-2H3,(H,67,70)(H,68,71)(H,83,84)(H,85,86)/b19-17-,20-18-/t46-,51+,52+,53-,54-,55+,56-,57-,58-,59+,60-,61-,62-,63-,64+,65+/m1/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | CCCCCCCC/C=C\CCCCCCCC(=O)O[C@@H](CO[P@@](=O)(OCCNC(=O)CCCCC(=O)NCCCO[C@@H]1O[C@@H](O)[C@H]([C@H]([C@@H]1NC(=O)O)O)O[C@H]1O[C@@H](O)[C@@H]([C@H]([C@H]1O)O[C@H]1O[C@@H](O)[C@@H]([C@H]([C@@H]1O)O)O)O)O)COC(=O)CCCCCCC/C=C\CCCCCCCC |
Number of atoms | 215 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 51922 |
Visibility | Public |
Molecule Tags |
Generating ...
Generating ...
Generating ...
No charge assignments available. Use the button above to use OFraMP fragment-based charge assignment.
Click table to toggle details.
Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:51:14 (hh:mm:ss) |
Access to this feature is currently restricted
The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
Access to this feature is currently restricted