Molecule Type | heteromolecule |
Residue Name (RNME) | _MKR |
Formula | C162H142O32S8 |
IUPAC InChI Key | QEWUQRYWEJGIMT-UHFFFAOYSA-N |
IUPAC InChI | InChI=1S/C162H166O32S8/c163-195(164,165)95-15-7-87-187-135-63-47-127(48-64-135)159(128-49-65-136(66-50-128)188-88-8-16-96-196(166,167)168)151-103-119(111-23-3-1-4-24-111)39-79-143(151)145-81-41-121(105-153(145)159)113-27-31-115(32-28-113)123-43-83-147-149-85-45-125(109-157(149)161(155(147)107-123,131-55-71-139(72-56-131)191-91-11-19-99-199(175,176)177)132-57-73-140(74-58-132)192-92-12-20-100-200(178,179)180)117-35-37-118(38-36-117)126-46-86-150-148-84-44-124(108-156(148)162(158(150)110-126,133-59-75-141(76-60-133)193-93-13-21-101-201(181,182)183)134-61-77-142(78-62-134)194-94-14-22-102-202(184,185)186)116-33-29-114(30-34-116)122-42-82-146-144-80-40-120(112-25-5-2-6-26-112)104-152(144)160(154(146)106-122,129-51-67-137(68-52-129)189-89-9-17-97-197(169,170)171)130-53-69-138(70-54-130)190-90-10-18-98-198(172,173)174/h1-6,23-86,103-110,163-186H,7-22,87-102H2 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | OS(CCCCOc1ccc(cc1)C1(c2ccc(cc2)OCCCCS(O)(O)O)c2cc(ccc2c2c1cc(cc2)c1ccc(cc1)c1ccc2c(c1)C(c1ccc(cc1)OCCCCS(O)(O)O)(c1ccc(cc1)OCCCCS(O)(O)O)c1c2ccc(c1)c1ccc(cc1)c1ccc2c(c1)C(c1ccc(cc1)OCCCCS(O)(O)O)(c1ccc(cc1)OCCCCS(O)(O)O)c1c2ccc(c1)c1ccccc1)c1ccc(cc1)c1ccc2c(c1)C(c1ccc(cc1)OCCCCS(O)(O)O)(c1ccc(cc1)OCCCCS(O)(O)O)c1c2ccc(c1)c1ccccc1)(O)O |
Number of atoms | 344 |
Net Charge | -8 |
Forcefield | multiple |
Molecule ID | 5931 |
Visibility | Public |
Molecule Tags |
Generating ...
Generating ...
Generating ...
No charge assignments available. Use the button above to use OFraMP fragment-based charge assignment.
Click table to toggle details.
Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 2 days, 0:15:14 (hh:mm:ss) |
Access to this feature is currently restricted
The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
Access to this feature is currently restricted