Molecule Type | heteromolecule |
Residue Name (RNME) | T7UG |
Formula | C54H89N8O26P2 |
IUPAC InChI Key | UNELJCQNRYHPAD-LMKWVHIBSA-N |
IUPAC InChI | InChI=1S/C54H93N8O26P2/c1-27(2)15-13-16-28(3)17-14-18-29(4)22-24-82-89(78,79)88-90(80,81)87-54-42(60-35(10)66)46(45(39(26-64)85-54)86-53-41(59-34(9)65)44(69)43(68)38(25-63)84-53)83-33(8)49(72)56-31(6)48(71)62-37(52(76)77)20-21-40(67)61-36(19-11-12-23-55)50(73)57-30(5)47(70)58-32(7)51(74)75/h15,17,22,30-33,36-39,41-46,53-54,63-64,68-69H,11-14,16,18-21,23-26H2,1-10,55H3,(H,56,72)(H,57,73)(H,58,70)(H,59,65)(H,60,66)(H,61,67)(H,62,71)(H,74,75)(H,76,77)(H,78,79)(H,80,81)/b28-17+,29-22+/t30-,31-,32+,33+,36-,37+,38+,39+,41+,42+,43+,44+,45+,46+,53-,54+/m0/s1 |
IUPAC Name | |
Common Name | |
Canonical SMILES (Daylight) | O=C(O)[C@@H](C)NC(=O)[C@H](C)NC(=O)[C@H](CCCC[NH3])NC(=O)CC[C@H](C(=O)O)NC(=O)[C@H](C)NC(=O)[C@@H](C)O[C@@H]1[C@@H](NC(=O)C)[C@H](O[C@H](CO)[C@H]1O[C@H]1[C@H](NC(=O)C)[C@@H](O)[C@H](O)[C@H](O1)CO)O[P@@](=O)(O)O[P@@](=O)(O)OC/C=C(\C)/CC/C=C(\C)/CCC=C(C)C |
Number of atoms | 179 |
Net Charge | -3 |
Forcefield | multiple |
Molecule ID | 701695 |
Visibility | Public |
Molecule Tags |
Generating ...
Generating ...
Generating ...
No charge assignments available. Use the button above to use OFraMP fragment-based charge assignment.
Click table to toggle details.
Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 0:23:06 (hh:mm:ss) |
Access to this feature is currently restricted
The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.
Access to this feature is currently restricted