3,4,6,7,8,9-Hexahydro-2H-pyrido[1,2-a]pyrimidine | C8H14N2 | MD Topology | NMR | X-Ray

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Molecule Information

Molecule Typeheteromolecule
Residue Name (RNME)42VH
FormulaC8H14N2
IUPAC InChI Key
NPFWMKHDSNBLHS-UHFFFAOYSA-N
IUPAC InChI
InChI=1S/C8H14N2/c1-2-6-10-7-3-5-9-8(10)4-1/h1-7H2
IUPAC Name
3,4,6,7,8,9-hexahydro-2H-pyrido[1,2-a]pyrimidine
Common Name3,4,6,7,8,9-Hexahydro-2H-pyrido[1,2-a]pyrimidine
Canonical SMILES (Daylight)
C1CCC2=NCCCN2C1
Number of atoms24
Net Charge0
Forcefieldmultiple
Molecule ID71373
ChemSpider ID8394961
ChEMBL ID 3303601
Visibility Public
Molecule Tags

Format

Molecular Dynamics (MD) Files

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X-Ray - Docking Files

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NMR Parameters

1H NMR Spectrum

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Fragment-Based Charges

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Topology History

Processing Information

QM Processing Stage

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Processing Stage Template Semi-Empirical QM (QM0) DFT QM (QM1) DFT Hessian QM (QM2)
Calculation None Energy Minization Energy Minization Hessian
Level of Theory None Semi-Empirical / SCF DFT (B3LYP/6-31G*) DFT (B3LYP/6-31G*)
Default Size Limit (Atoms) 2000 500 50 40
Content of MD Topology
Charges Derived From None MOPAC Merz-Singh-Kollman Merz-Singh-Kollman
Geometry  User Provided Optimized Optimized Optimized
Non-Bonded Interactions Bonds Rule Based:

Parameters are asigned from existing parameters with a set of rules based on atom types and geometry.

Hessian Based:

Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists.

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Data

Current Processing StateCompleted
Total Processing Time11 days, 7:17:49 (hh:mm:ss)

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Calculated Solvation Free Energy

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