C120H202O101 | MD Topology | NMR | X-Ray

Visualize with JSmol

Molecule Information

Molecule Typeheteromolecule
Residue Name (RNME)6W16
FormulaC120H202O101
IUPAC InChI Key
CTEVPRINKWERLG-LOBPSKEGSA-N
IUPAC InChI
InChI=1S/C120H202O101/c121-1-21-41(141)42(142)63(163)102(184-21)204-83-23(3-123)186-104(65(165)44(83)144)206-85-25(5-125)188-106(67(167)46(85)146)208-87-27(7-127)190-108(69(169)48(87)148)210-89-29(9-129)192-110(71(171)50(89)150)212-91-31(11-131)194-112(73(173)52(91)152)214-93-33(13-133)196-114(75(175)54(93)154)216-95-35(15-135)198-116(77(177)56(95)156)218-97-37(17-137)200-118(79(179)58(97)158)220-99-39(19-139)202-120(81(181)60(99)160)221-100-40(20-140)201-119(80(180)61(100)161)219-98-38(18-138)199-117(78(178)59(98)159)217-96-36(16-136)197-115(76(176)57(96)157)215-94-34(14-134)195-113(74(174)55(94)155)213-92-32(12-132)193-111(72(172)53(92)153)211-90-30(10-130)191-109(70(170)51(90)151)209-88-28(8-128)189-107(68(168)49(88)149)207-86-26(6-126)187-105(66(166)47(86)147)205-84-24(4-124)185-103(64(164)45(84)145)203-82-22(2-122)183-101(182)62(162)43(82)143/h21-182H,1-20H2/t21-,22+,23-,24-,25-,26-,27-,28-,29-,30-,31-,32-,33-,34-,35-,36-,37-,38-,39-,40-,41+,42+,43+,44+,45+,46-,47+,48+,49-,50-,51+,52+,53-,54-,55+,56+,57-,58-,59+,60+,61-,62-,63+,64+,65-,66-,67+,68+,69-,70-,71+,72+,73-,74-,75+,76+,77-,78-,79+,80+,81-,82+,83+,84+,85+,86+,87+,88+,89+,90+,91+,92+,93+,94+,95+,96+,97+,98+,99+,100+,101-,102+,103+,104+,105+,106+,107+,108+,109+,110+,111+,112+,113+,114+,115+,116+,117+,118+,119+,120+/m0/s1
IUPAC Name
Common Name
Canonical SMILES (Daylight)
OC[C@@H]1O[C@H](O[C@@H]2[C@H](CO)O[C@@H]([C@H]([C@H]2O)O)O[C@@H]2[C@H](CO)O[C@@H]([C@@H]([C@@H]2O)O)O[C@@H]2[C@H](CO)O[C@@H]([C@H]([C@H]2O)O)O[C@@H]2[C@H](CO)O[C@@H]([C@@H]([C@@H]2O)O)O[C@@H]2[C@H](CO)O[C@@H]([C@H]([C@H]2O)O)O[C@@H]2[C@H](CO)O[C@@H]([C@@H]([C@@H]2O)O)O[C@@H]2[C@H](CO)O[C@@H]([C@H]([C@H]2O)O)O[C@@H]2[C@H](CO)O[C@@H]([C@@H]([C@H]2O)O)O[C@@H]2[C@@H](CO)O[C@@H]([C@H]([C@H]2O)O)O)[C@@H]([C@@H]([C@@H]1O[C@H]1O[C@@H](CO)[C@H]([C@@H]([C@@H]1O)O)O[C@H]1O[C@@H](CO)[C@H]([C@H]([C@H]1O)O)O[C@H]1O[C@@H](CO)[C@H]([C@@H]([C@@H]1O)O)O[C@H]1O[C@@H](CO)[C@H]([C@H]([C@H]1O)O)O[C@H]1O[C@@H](CO)[C@H]([C@@H]([C@@H]1O)O)O[C@H]1O[C@@H](CO)[C@H]([C@H]([C@H]1O)O)O[C@H]1O[C@@H](CO)[C@H]([C@@H]([C@@H]1O)O)O[C@H]1O[C@@H](CO)[C@H]([C@H]([C@H]1O)O)O[C@H]1O[C@@H](CO)[C@H]([C@@H]([C@@H]1O)O)O[C@H]1O[C@@H](CO)[C@H]([C@H]([C@H]1O)O)O)O)O
Number of atoms423
Net Charge0
Forcefieldmultiple
Molecule ID719217
Visibility Public
Molecule Tags

Format

Molecular Dynamics (MD) Files

Generating ...

X-Ray - Docking Files

Generating ...

NMR Parameters

1H NMR Spectrum

Generating ...

Fragment-Based Charges

No charge assignments available. Use the button above to use OFraMP fragment-based charge assignment.

Topology History

Processing Information

QM Processing Stage

Click table to toggle details.

Processing Stage Template Semi-Empirical QM (QM0) DFT QM (QM1) DFT Hessian QM (QM2)
Calculation None Energy Minization Energy Minization Hessian
Level of Theory None Semi-Empirical / SCF DFT (B3LYP/6-31G*) DFT (B3LYP/6-31G*)
Default Size Limit (Atoms) 2000 500 50 40
Content of MD Topology
Charges Derived From None MOPAC Merz-Singh-Kollman Merz-Singh-Kollman
Geometry  User Provided Optimized Optimized Optimized
Non-Bonded Interactions Bonds Rule Based:

Parameters are asigned from existing parameters with a set of rules based on atom types and geometry.

Hessian Based:

Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists.

Angles
Dihedrals

Data

Current Processing StateCompleted
Total Processing Time11:38:09 (hh:mm:ss)

ATB Pipeline Setting

Access to this feature is currently restricted

The maximum QM level is computed using the ATB Pipeline atom limits but can be manually increased on a case by case basis.

Calculated Solvation Free Energy

Access to this feature is currently restricted

Submit New Solvation Free Energy Computation