Molecule Type | heteromolecule |
Residue Name (RNME) | Y85I |
Formula | C9H12N4O4 |
IUPAC InChI Key | NTDCCAQRCIVTIY-PRJMDXOYSA-N |
IUPAC InChI | InChI=1S/C9H14N4O4/c10-9(17)5-2-13(12-11-5)6-1-4(3-14)7(15)8(6)16/h1,6-8,12,14-16H,2-3H2,(H2,10,17)/t6-,7-,8+/m1/s1 |
IUPAC Name | 1-[(1R,4R,5S)-4,5-dihydroxy-3-(hydroxymethyl)-1-cyclopent-2-enyl]triazole-4-carboxamide |
Common Name | 1-[(1R,4R,5S)-4,5-Dihydroxy-3-(hydroxymethyl)-2-cyclopenten-1-yl]-1H-1,2,3-triazole-4-carboxamide |
Canonical SMILES (Daylight) | OCC1=C[C@H]([C@@H]([C@@H]1O)O)N1N=[N]=[C](=C1)C(=O)N |
Number of atoms | 29 |
Net Charge | 0 |
Forcefield | multiple |
Molecule ID | 143281 |
ChemSpider ID | 9883248 |
ChEMBL ID | 203308 |
Visibility | Public |
Molecule Tags |
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Processing Stage | Template | Semi-Empirical QM (QM0) | DFT QM (QM1) | DFT Hessian QM (QM2) | |
---|---|---|---|---|---|
Calculation | None | Energy Minization | Energy Minization | Hessian | |
Level of Theory | None | Semi-Empirical / SCF | DFT (B3LYP/6-31G*) | DFT (B3LYP/6-31G*) | |
Default Size Limit (Atoms) | 2000 | 500 | 50 | 40 | |
Content of MD Topology | |||||
Charges Derived From | None | MOPAC | Merz-Singh-Kollman | Merz-Singh-Kollman | |
Geometry | User Provided | Optimized | Optimized | Optimized | |
Non-Bonded Interactions | Bonds | Rule Based: Parameters are asigned from existing parameters with a set of rules based on atom types and geometry. | Hessian Based: Force constant are calculated from the QM potential. New parameters are created when no suitable parameters exists. | ||
Angles | |||||
Dihedrals |
Current Processing State | Completed |
Total Processing Time | 4 days, 10:07:55 (hh:mm:ss) |
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